Reconstructing protein structure from solvent exposure using tabu search.
Martin PaluszewskiThomas HamelryckPawel WinterPublished in: Algorithms Mol. Biol. (2006)
Keyphrases
- tabu search
- protein structure
- simulated annealing
- metaheuristic
- feasible solution
- path relinking
- molecular biology
- scheduling problem
- protein sequences
- heuristic methods
- hybrid algorithm
- search procedure
- search algorithm
- secondary structure
- job shop scheduling problem
- memetic algorithm
- genetic algorithm
- iterated local search
- protein tertiary structure
- protein structure prediction
- initial solution
- vehicle routing problem
- protein function
- benchmark instances
- combinatorial optimization
- amino acid sequences
- solution quality
- scatter search
- nuclear magnetic resonance
- amino acids
- max sat
- multi start
- protein structural
- protein structure alignment
- experimentally determined
- candidate list
- tabu list
- neural network
- quadratic assignment problem
- constraint satisfaction
- search space
- decision trees