An expert system to identify transcription factor binding target genes by phylogenetic footprinting.
Yi-Ming SunJorng-Tzong HorngJyh-Huang TorngLi-Ching WuPublished in: Expert Syst. Appl. (2009)
Keyphrases
- transcription factor binding sites
- transcription factors
- dna binding
- transcriptional regulation
- binding sites
- dna sequences
- gene expression
- microarray
- genome sequences
- genome wide
- component analysis
- regulatory elements
- saccharomyces cerevisiae
- gene regulation
- motif discovery
- sequence data
- systems biology
- gene expression levels
- biological processes
- chip seq
- genomic data
- computational biology
- high throughput
- regulatory networks
- biomedical literature
- microarray data
- computational methods
- gene sets
- gene expression data
- experimental conditions
- biologically inspired
- data sets