CompGO: an R package for comparing and visualizing Gene Ontology enrichment differences between DNA binding experiments.
Ashley J. WaardenbergSamuel D. BassettRomaric BouveretRichard P. HarveyPublished in: BMC Bioinform. (2015)
Keyphrases
- gene ontology
- dna binding
- microarray
- protein interaction
- transcription factors
- gene expression
- protein protein interactions
- information theoretic
- semantic similarity
- protein function
- binding sites
- statistically significant
- high throughput
- genome wide
- biological processes
- microarray data
- gene expression data
- regulatory networks
- biological networks
- high dimensionality
- molecular biology
- motif discovery
- computational methods