Derivative-free neural network for optimizing the scoring functions associated with dynamic programming of pairwise-profile alignment.
Kazunori D. YamadaPublished in: Algorithms Mol. Biol. (2018)
Keyphrases
- scoring functions
- pairwise
- derivative free
- sequence alignment
- neural learning
- neural network
- dynamic programming
- similarity measure
- scoring function
- multi layered
- unconstrained optimization
- gradient method
- artificial neural networks
- back propagation
- optimization methods
- objective function
- semi supervised
- belief propagation
- linear programming
- markov random field
- optimal solution
- genetic algorithm
- incremental learning
- reinforcement learning
- image segmentation
- information retrieval
- fan beam
- machine learning