Using local gene expression similarities to discover regulatory binding site modules.
Bartek WilczynskiTorgeir R. HvidstenAndriy KryshtafovychJerzy TiurynHenryk Jan KomorowskiKrzysztof FidelisPublished in: BMC Bioinform. (2006)
Keyphrases
- gene expression
- binding sites
- transcription factors
- regulatory elements
- gene regulation
- microarray
- dna binding
- dna sequences
- biological processes
- gene expression data
- sequence data
- cis regulatory
- functional modules
- microarray data
- motif discovery
- gene expression patterns
- regulatory networks
- saccharomyces cerevisiae
- genomic data
- protein interaction
- differentially expressed genes
- gene expression profiles
- gene expression analysis
- component analysis
- genome wide
- dna microarray
- transcription factor binding sites
- microarray data analysis
- biological networks
- statistical significance
- computational biology
- high throughput
- transcriptional regulation