180-nm-CMOS 15-Giga-cell-updates-per-second DNA sequence alignment engine based on asynchronous race conditions.
Advait MadhavanTimothy SherwoodDmitri B. StrukovPublished in: CICC (2017)
Keyphrases
- sequence alignment
- binding sites
- comparative genomics
- sequence databases
- pairwise
- phylogenetic analysis
- dna sequences
- protein sequences
- delay insensitive
- cmos technology
- gene expression
- dynamic programming
- smith waterman
- biological sequences
- high speed
- low cost
- gpu accelerated
- silicon on insulator
- amino acids
- low power
- power consumption
- experimental conditions
- dna computing
- multiple alignment
- nm technology