Serial evolutionary networks of within-patient HIV-1 sequences reveal patterns of evolution of X4 strains.
Patricia BuendiaGiri NarasimhanPublished in: BMC Syst. Biol. (2009)
Keyphrases
- horizontal gene transfer
- drug resistance
- sequential patterns
- temporal evolution
- network dynamics
- temporal sequences
- complex patterns
- hidden markov models
- temporal patterns
- phylogenetic trees
- network analysis
- evolutionary process
- genetic algorithm
- sequence patterns
- pattern mining
- evolutionary robotics
- social networks
- temporal behavior
- natural selection
- multiple sequence alignment
- medical treatment
- link formation
- sequence databases
- patient data
- sequential data
- network structure
- pattern discovery
- medical data
- population dynamics
- data mining techniques
- genetic programming
- x ray
- evolutionary computation
- gene duplication
- medical records
- evolutionary game theory
- clinical data
- sequential pattern mining
- sequence alignment
- evolution process
- coarse grained