On the choice of negative examples for prediction of host-pathogen protein interactions.
Don NeumannSoumyadip RoyFayyaz ul Amir Afsar MinhasAsa Ben-HurPublished in: Frontiers Bioinform. (2022)
Keyphrases
- protein interaction
- negative examples
- positive examples
- protein protein interactions
- concept learning
- training data
- computational methods
- gene expression
- training examples
- binary classification
- prediction accuracy
- biological systems
- biological data
- gene ontology
- systems biology
- biomedical literature
- background knowledge
- positive and negative
- databases
- knowledge base
- multi class
- support vector
- training set
- network topology
- unlabeled data
- text classification