-regulatory elements based on DNA free energy and single nucleotide polymorphism density.
Redi AditamaZulfikar Achmad TanjungVictor AprilyantoWidyartini Made SudaniaCondro UtomoTony LiwangPublished in: Comput. Biol. Chem. (2023)
Keyphrases
- dna sequences
- regulatory elements
- free energy
- single nucleotide polymorphisms
- human genome
- binding sites
- belief propagation
- upper bound
- approximate inference
- transcription factors
- genomic sequences
- transcription factor binding sites
- graphical models
- co occurrence
- high throughput
- data sets
- graph cuts
- genome wide
- markov random field
- support vector