Exploring evolution-based & -free protein language models as protein function predictors.
Mingyang HuFajie YuanKevin K. YangFusong JuJin SuHui WangFei YangQiuyang DingPublished in: CoRR (2022)
Keyphrases
- protein function
- language model
- protein sequences
- amino acids
- language modeling
- protein structure
- protein protein interactions
- protein functional
- protein function prediction
- amino acid sequences
- protein interaction networks
- gene ontology
- information retrieval
- protein structure prediction
- probabilistic model
- query expansion
- gene expression profiles
- computational methods
- computational tools
- protein interaction
- functional modules
- smoothing methods
- physicochemical properties
- protein complexes
- protein interaction data
- biomedical literature
- protein folding
- coarse grained
- high throughput
- information extraction
- keywords