EPSAPG: A Pipeline Combining MMseqs2 and PSI-BLAST to Quickly Generate Extensive Protein Sequence Alignment Profiles.
Issar ArabPublished in: CoRR (2023)
Keyphrases
- psi blast
- sequence alignment
- amino acids
- protein sequences
- pairwise
- remote homology detection
- protein secondary structure
- dynamic programming
- sequence analysis
- protein secondary structure prediction
- protein classification
- secondary structure
- smith waterman
- protein structural
- multiple alignment
- protein structure
- multiple sequence alignment
- binding sites
- statistical significance
- protein structure prediction
- amino acid sequences
- protein function
- tertiary structure
- computational biology