CORE_TF: a user-friendly interface to identify evolutionary conserved transcription factor binding sites in sets of co-regulated genes.
Matthew S. HestandMichiel van GalenMichel P. VilleriusGert-Jan B. van OmmenJohan T. den DunnenPeter A. C. 't HoenPublished in: BMC Bioinform. (2008)
Keyphrases
- transcription factor binding sites
- transcription factors
- binding sites
- dna sequences
- gene expression
- microarray
- regulatory elements
- component analysis
- protein coding regions
- gene regulation
- regulatory networks
- genome wide
- coding regions
- dna binding
- computational biology
- biological processes
- sequence data
- gene sets
- evolutionary algorithm
- motif discovery
- gene expression data
- high throughput
- co occurrence