HeliCis: a DNA motif discovery tool for colocalized motif pairs with periodic spacing.
Erik LarssonPer LindahlPetter MostadPublished in: BMC Bioinform. (2007)
Keyphrases
- motif discovery
- dna sequences
- binding sites
- biological sequences
- recurring patterns
- motif finding
- pattern discovery
- sequence analysis
- motif discovery algorithm
- data mining tasks
- multiobjective optimization
- computational biology
- transcription factors
- biological networks
- sequence data
- molecular biology
- gene expression
- pairwise
- data mining algorithms
- data mining
- statistical significance
- transcription factor binding sites
- multi dimensional
- sequence databases
- swarm intelligence
- genomic sequences
- multi objective