A New Context Tree Inference Algorithm for Variable Length Markov Chain Model with Applications to Biological Sequence Analyses.
Shaokun AnJie RenFengzhu SunLin WanPublished in: J. Comput. Biol. (2022)
Keyphrases
- markov chain
- markov model
- tree structure
- monte carlo simulation
- gibbs sampling
- probabilistic model
- variable length
- monte carlo
- transition matrix
- expectation maximization
- em algorithm
- gibbs sampler
- neural network
- monte carlo method
- markov chain monte carlo
- algo rithm
- parameter estimation
- optimal solution
- transition probabilities
- similarity measure
- learning algorithm
- bayesian framework
- random walk
- computational complexity
- search space
- fixed length
- feature space
- stationary distribution