A weighting system and algorithm for aligning many phylogenetically related sequences.
Osamu GotohPublished in: Comput. Appl. Biosci. (1995)
Keyphrases
- learning algorithm
- k means
- experimental evaluation
- improved algorithm
- cost function
- np hard
- theoretical analysis
- preprocessing
- computational complexity
- significant improvement
- detection algorithm
- optimization algorithm
- particle swarm optimization
- times faster
- matching algorithm
- input data
- linear programming
- simulated annealing
- high accuracy
- worst case
- similarity measure
- estimation algorithm
- dynamic programming
- objective function
- optimal solution
- suffix tree
- data sets
- scheduling problem
- probabilistic model
- lower bound