Accelerating Approximate Subsequence Search on Large Protein Sequence Databases.
Jiong YangWei WangYi XiaPhilip S. YuPublished in: CSB (2002)
Keyphrases
- sequence databases
- protein sequences
- sequence data
- similarity search
- sequential pattern mining
- search tools
- biological data
- sequential patterns
- subsequence matching
- search algorithm
- indexing methods
- pattern matching
- index structure
- sequence alignment
- multi dimensional
- databases
- pattern mining
- amino acids
- dynamic time warping
- dynamic programming
- similarity measure
- secondary structure
- database systems
- feature selection