Reference-based compression of short-read sequences using path encoding.
Carl KingsfordRob PatroPublished in: Bioinform. (2015)
Keyphrases
- variable length
- arithmetic coding
- data compression
- compression scheme
- run length encoding
- image compression
- compression algorithm
- hidden markov models
- efficient compression
- shortest path
- sequential patterns
- image coding algorithm
- reference genome
- data structure
- wavelet transformed
- compression ratio
- encoding scheme
- fractal image compression
- long sequences
- bit rate
- lempel ziv