Matching reads to many genomes with the r-index.

Taher Mun Alan Kuhnle Christina Boucher Travis Gagie Ben Langmead Giovanni Manzini

Published in: CoRR (2019)

Keyphrases

matching algorithm
pattern matching
face recognition
image matching
graph matching
sequence data
structural similarity
genomic data
object recognition
index structure
template matching
shape matching
indexing method
matching scheme
comparative genomics