A Gibbs Sampling Method to Detect Overrepresented Motifs in the Upstream Regions of Coexpressed Genes.
Gert ThijsKathleen MarchalMagali LescotStephane RombautsBart De MoorPierre RouzéYves MoreauPublished in: J. Comput. Biol. (2002)
Keyphrases
- motif discovery
- transcription factor binding sites
- dna sequences
- coding regions
- binding sites
- gene expression
- regulatory networks
- biological sequences
- pattern discovery
- transcription factors
- data mining tasks
- dna binding
- multiobjective optimization
- sequence data
- biological networks
- computational biology
- microarray data
- genomic sequences
- gene expression data
- rna sequences
- pairwise
- human genome
- statistical significance
- data mining algorithms
- markov random field
- data mining
- cis regulatory