Inferring pathways from gene lists using a literature-derived network of biological relationships.
Dilip RajagopalanPankaj AgarwalPublished in: Bioinform. (2005)
Keyphrases
- biological entities
- biomedical literature
- interaction networks
- protein protein interaction networks
- biological processes
- genome scale
- gene products
- genetic networks
- biological systems
- protein interaction
- regulatory networks
- signaling pathways
- text mining
- protein complexes
- gene interactions
- gene expression
- biologically meaningful
- biological knowledge
- signal transduction pathways
- gene networks
- systems biology
- biological data
- network model
- network structure
- expression profiles
- functional modules
- related genes
- biological pathways
- metabolic networks
- semantic relationships
- complex networks
- peer to peer