Small changes in free energy assignments for unpaired bases do not affect predicted secondary structures in single stranded RNA.
Ruth NussinovIgnacio Tinoco Jr.A. B. JacobsonPublished in: Nucleic Acids Res. (1982)
Keyphrases
- free energy
- rna sequences
- secondary structure
- rna secondary structure prediction
- belief propagation
- upper bound
- fixed point
- rna secondary structures
- posterior distribution
- approximate inference
- competitive learning
- computational methods
- protein sequences
- protein structure
- rna molecules
- neural network
- structural features
- message passing
- energy minimization
- graph cuts
- rna structures