A fast algorithm for exact sequence search in biological sequences using polyphase decomposition.
Abhilash SrikanthaAjit S. BopardikarKalyan Kumar KaipaParthasarathy VenkataramanKyusang LeeTaeJin AhnRangavittal NarayananPublished in: Bioinform. (2010)
Keyphrases
- biological sequences
- sequence databases
- protein sequences
- sequence data
- molecular biology
- dna sequences
- smith waterman
- motif finding
- longest common subsequence
- biological data
- computational biology
- search tools
- search methods
- binding sites
- pairwise
- motif discovery
- natural language
- sequential patterns
- self organizing maps
- subsequence matching
- database