Approximation Algorithm and Scheme for RNA Maximum Weighted Stacking.
Hengwu LiHuijian HanZhenzhong XuPublished in: J. Softw. (2011)
Keyphrases
- polynomial time approximation
- computational cost
- theoretical analysis
- expectation maximization
- dynamic programming
- experimental evaluation
- convergence rate
- matching algorithm
- error bounds
- np hard
- probabilistic model
- worst case
- detection algorithm
- optimization algorithm
- cost function
- significant improvement
- preprocessing
- bayesian networks
- linear programming
- voting scheme
- polygonal approximation
- weight function
- absolute error
- randomized approximation
- recognition algorithm
- learning algorithm
- simulated annealing
- computational complexity
- objective function
- clustering algorithm