Detecting list-colored graph motifs in biological networks using branch-and-bound strategy.
Yiran HuangCheng ZhongPublished in: Comput. Biol. Medicine (2019)
Keyphrases
- branch and bound
- biological networks
- graph mining
- protein function prediction
- lower bound
- search algorithm
- branch and bound algorithm
- protein interaction networks
- functional modules
- search space
- optimal solution
- network motifs
- upper bound
- complex networks
- biological data
- gene expression
- combinatorial optimization
- biological systems
- link prediction
- community detection
- branch and bound procedure
- tree search
- pattern mining
- graph mining algorithms
- random walk
- protein protein interactions
- search strategy
- network analysis
- motif discovery
- graph theory
- microarray
- community structure
- connected components
- data sets
- gene regulatory networks
- computational methods
- simulated annealing
- data model