EPSAPG: A Pipeline Combining MMseqs2 and PSI-BLAST to Quickly Generate Extensive Protein Sequence Alignment Profiles.
Issar ArabPublished in: BDCAT (2023)
Keyphrases
- psi blast
- sequence alignment
- amino acids
- protein sequences
- remote homology detection
- pairwise
- dynamic programming
- protein classification
- protein secondary structure
- protein structural
- multiple alignment
- secondary structure
- protein secondary structure prediction
- sequence analysis
- smith waterman
- binding sites
- multiple sequence alignment
- protein structure
- protein function
- protein structure prediction
- protein folding
- statistical significance