Identification of putative regulatory upstream ORFs in the yeast genome using heuristics and evolutionary conservation.
Marija CvijovicDaniel DaleviElizabeth BilslandGraham J. L. KempPer SunnerhagenPublished in: BMC Bioinform. (2007)
Keyphrases
- transcriptional regulatory
- transcription factors
- gene expression
- transcriptional regulation
- regulatory networks
- transcription factor binding sites
- binding sites
- microarray
- genome wide
- saccharomyces cerevisiae
- genetic algorithm
- dna sequences
- high throughput
- gene expression data
- differentially expressed genes
- supply chain
- protein protein interactions
- search algorithm
- regulatory elements
- evolutionary computation
- high dimensionality
- component analysis
- protein protein interaction networks
- multiple sequence alignments
- dna binding
- data sets
- genetic programming
- gene regulation
- cell cycle
- motif discovery
- biomedical literature
- sequence data