PyBSASeq: a simple and effective algorithm for bulked segregant analysis with whole-genome sequencing data.
Jianbo ZhangDilip R. PantheePublished in: BMC Bioinform. (2020)
Keyphrases
- input data
- statistical analysis
- data analysis
- noisy data
- data sets
- detection algorithm
- preprocessing
- database
- prior information
- data reduction
- k means
- incomplete data
- computationally efficient
- synthetic data
- learning algorithm
- computational cost
- np hard
- dynamic programming
- information loss
- original data
- missing data
- computational complexity
- data collection
- optimal solution
- segmentation algorithm
- optimization algorithm
- contingency tables
- expectation maximization
- recognition algorithm
- synthetic datasets
- high dimensional data
- dimensional data
- clustering method
- data mining techniques
- worst case
- knowledge discovery
- data points
- data sources
- search space
- high quality
- training data
- genetic algorithm
- similarity measure
- data distribution
- image data
- spectral clustering
- lower bound
- decision trees