A High-throughput Parallel Viterbi Algorithm via Bitslicing.
Saleh Khalaj MonfaredOmid HajihassaniVahid MohsseniDara RahmatiSaeid GorginPublished in: ACM Trans. Parallel Comput. (2021)
Keyphrases
- high throughput
- viterbi algorithm
- hidden markov models
- dynamic programming
- biological data
- genome wide
- microarray
- markov model
- systems biology
- n gram
- low latency
- data acquisition
- genomic data
- protein protein interactions
- mass spectrometry
- mass spectrometry data
- computational methods
- gene expression
- living cells
- database systems
- gene regulatory networks
- recurrent neural networks
- gene expression data
- data analysis
- data sets
- dna sequencing