Login / Signup

Accelerating Smith-Waterman Algorithm for Biological Database Search on CUDA-Compatible GPUs.

Yuma MunekawaFumihiko InoKenichi Hagihara
Published in: IEICE Trans. Inf. Syst. (2010)
Keyphrases
  • database
  • search space
  • smith waterman
  • dynamic programming
  • databases
  • parallel implementation
  • search algorithm
  • gpu implementation
  • pairwise
  • multi step