De Novo Clustering of Long-Read Transcriptome Data Using a Greedy, Quality-Value Based Algorithm.
Kristoffer SahlinPaul MedvedevPublished in: RECOMB (2019)
Keyphrases
- k means
- input data
- clustering method
- data reduction
- spectral clustering
- data sets
- noisy data
- dynamic programming
- worst case
- data quality
- expectation maximization
- clustering algorithm
- clustering result
- similarity matrix
- locally optimal
- cluster centers
- high quality
- cluster structure
- search space
- detection algorithm
- clustering analysis
- high dimensional data
- training data
- hierarchical clustering algorithm
- quality measures
- dissimilarity matrix
- synthetic datasets
- multidimensional scaling
- data mining tasks
- data clustering
- data structure
- hierarchical clustering
- document clustering
- simulated annealing
- high dimensional
- search algorithm
- optimal solution
- clustering ensemble
- decision trees
- feature selection
- learning algorithm