Inferring activity changes of transcription factors by binding association with sorted expression profiles.
Chao ChengXiting YanFengzhu SunLei M. LiPublished in: BMC Bioinform. (2007)
Keyphrases
- transcription factors
- expression profiles
- dna binding
- microarray
- binding sites
- gene expression
- transcription factor binding sites
- genome wide
- component analysis
- cell cycle
- gene expression profiles
- computational biology
- differentially expressed
- cis regulatory
- dna sequences
- gene networks
- gene expression data
- gene sets
- microarray data
- regulatory networks
- high throughput
- co occurrence
- biological processes
- systems biology
- biomedical literature
- highly correlated
- sequence data
- meta analysis
- high dimensionality
- motif discovery
- microarray datasets
- gene ontology
- differentially expressed genes
- molecular biology
- average precision
- saccharomyces cerevisiae
- gene selection
- statistical significance
- protein sequences