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A novel fast and memory efficient parallel MLCS algorithm for long and large-scale sequences alignments.
Yanni Li
Yuping Wang
Zhensong Zhang
Yaxin Wang
Ding Ma
Jianbin Huang
Published in:
ICDE (2016)
Keyphrases
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memory efficient
multiple sequence alignment
parallel implementation
sequence alignment
learning algorithm
detection algorithm
matching algorithm
objective function
times faster
tree structure
worst case
np hard
dynamic programming
k means
external memory
search space
orders of magnitude faster
multiple alignment