High-recall protein entity recognition using a dictionary.
Zhenzhen KouWilliam W. CohenRobert F. MurphyPublished in: ISMB (Supplement of Bioinformatics) (2005)
Keyphrases
- high recall
- high precision
- protein protein interactions
- precision and recall
- protein structure
- sparse representation
- amino acids
- subcellular localization
- entity identification
- protein structure prediction
- named entity recognizer
- protein interaction data
- protein sequences
- named entities
- knowledge base
- protein function
- molecular dynamics
- protein interaction networks
- exact match
- contact map
- predicting protein
- dead end
- entity ranking
- protein interaction
- sequence alignment
- complex networks
- information retrieval
- molecular structures
- mass spectrometry
- information extraction
- tandem mass spectra