AlineaGA - a genetic algorithm with local search optimization for multiple sequence alignment.
Fernando José Mateus da SilvaJuan Manuel Sánchez-PérezJuan Antonio Gómez PulidoMiguel A. Vega-RodríguezPublished in: Appl. Intell. (2010)
Keyphrases
- genetic algorithm
- multiple sequence alignment
- global search
- simulated annealing
- memory efficient
- search heuristics
- optimization problems
- combinatorial optimization
- multiple alignment
- evolutionary algorithm
- tabu search
- fitness function
- multi objective
- neural network
- protein sequences
- computational biology
- particle swarm optimization
- search procedure
- biological sequences
- constraint satisfaction
- search strategies
- knowledge discovery
- search algorithm