A scalable multiple pairwise protein sequence alignment acceleration using hybrid CPU-GPU approach.
Luay AlawnehMohammed A. ShehabMahmoud Al-AyyoubYaser JararwehZiad A. Al-SharifPublished in: Clust. Comput. (2020)
Keyphrases
- intel xeon
- sequence alignment
- pairwise
- protein sequences
- amino acids
- multiple sequence alignment
- dynamic programming
- gpu accelerated
- similarity measure
- sequence databases
- comparative genomics
- multiple alignment
- protein structure
- phylogenetic analysis
- multi dimensional
- biological sequences
- binding sites
- parallel implementation
- protein classification
- statistical analysis