Conditional Random Fields for Predicting and Analyzing Histone Occupancy, Acetylation and Methylation Areas in DNA Sequences.
Dang Hung TranTho Hoan PhamKenji SatouTu Bao HoPublished in: EvoWorkshops (2006)
Keyphrases
- dna sequences
- conditional random fields
- human genome
- graphical models
- information extraction
- sequence labeling
- tandem repeats
- probabilistic model
- hidden markov models
- higher order
- structured prediction
- random fields
- named entity recognition
- generative model
- dna computing
- sequence patterns
- crf model
- web page prediction
- motif discovery
- binding sites
- markov random field
- coding regions
- semi markov
- pairwise
- rna sequences
- prior knowledge
- machine learning