Associating biological context with protein-protein interactions through text mining at PubMed scale.
Daniel N. SosaRogier HintzenBetty XiongAlex de GiorgioJulien FauqueurMark DaviesJake LeverRuss B. AltmanPublished in: J. Biomed. Informatics (2023)
Keyphrases
- biomedical literature
- protein protein interactions
- text mining
- biological processes
- biological data
- protein interaction
- functional modules
- protein protein
- biological knowledge
- gene ontology
- high throughput
- computational methods
- protein complexes
- drug design
- systems biology
- computational approaches
- protein protein interaction networks
- interacting proteins
- predicting protein protein interactions
- protein interaction data
- regulatory networks
- information extraction
- genomic data
- network topology
- cell cycle
- automatic extraction
- information retrieval
- data mining
- protein function
- natural language processing
- knowledge discovery
- ppi networks
- biological networks
- molecular biology
- network analysis
- protein interaction networks
- data integration
- energy consumption
- document clustering
- signaling pathways
- association rules
- interaction networks
- structural properties
- machine learning