Protein-protein interaction extraction from biomedical literatures based on modified SVM-KNN.
Lishuang LiLinmei JingDegen HuangPublished in: NLPKE (2009)
Keyphrases
- knn
- protein protein interactions
- biomedical literature
- k nearest neighbor
- support vector machine svm
- nearest neighbor
- biological processes
- high throughput
- k nearest neighbour
- computational methods
- information extraction
- automatic extraction
- protein interaction
- classification algorithm
- functional modules
- protein complexes
- support vector machine
- text categorization
- network topology
- gene ontology
- classification method
- computational approaches
- structural properties
- text classification
- distance function
- biological data
- biological networks
- systems biology
- ppi networks
- high precision
- network analysis
- knn algorithm
- knn classifier
- neural network
- feature selection
- nearest neighbour
- protein interaction networks
- text mining
- high dimensional data
- input space
- data sets
- microarray
- mutual information
- support vector
- information retrieval
- databases