Evaluating template-based and template-free protein-peptide complex structure prediction using AlphaFold2.
Negin ManshourYang YuWenyuan QinFei HeDuolin WangDong XuPublished in: BIBM (2022)
Keyphrases
- complex structures
- amino acids
- mass spectrometry
- tandem mass spectra
- protein classification
- mhc class ii
- protein structure prediction
- contact map
- subcellular localization
- mass spectra
- protein sequences
- protein secondary structure
- contact maps
- tandem mass spectrometry
- prediction accuracy
- drug design
- protein structure
- expert systems
- experimentally determined
- physicochemical properties
- ms ms
- secondary structure
- protein protein interactions
- protein interaction
- remote homology detection
- query processing
- social networks
- high throughput
- relational databases