Combining N-grams and Alignment in G-protein Coupling Specificity Prediction.
Betty Yee Man ChengJaime G. CarbonellPublished in: APBC (2007)
Keyphrases
- n gram
- remote homology detection
- contact map
- subcellular localization
- language model
- protein structure alignment
- word level
- sequence alignment
- multiple sequence alignments
- variable length
- protein structure prediction
- text classification
- language independent
- protein secondary structure
- prediction accuracy
- bag of words
- multiple sequence alignment
- drug design
- language modeling
- protein sequences
- language modelling
- protein interaction
- psi blast
- protein secondary structure prediction
- part of speech
- viterbi algorithm
- protein classification
- protein structure
- data mining
- inside outside algorithm
- physicochemical properties
- character n grams
- information retrieval