PIKE-R2P: Protein-protein interaction network-based knowledge embedding with graph neural network for single-cell RNA to protein prediction.
Xinnan DaiFan XuShike WangPiyushkumar A. MundraJie ZhengPublished in: BMC Bioinform. (2021)
Keyphrases
- protein protein interactions
- protein interaction
- predicting protein
- protein function prediction
- cellular processes
- secondary structure
- drug design
- protein interaction networks
- protein function
- computational methods
- cell cycle
- protein interaction data
- high throughput
- wet lab
- biological knowledge
- protein complexes
- functional modules
- interacting proteins
- experimentally determined
- gene ontology
- predicting protein protein interactions
- biological processes
- network topology
- protein structure
- protein protein
- protein sequences
- biological data
- signaling pathways
- high precision
- multiple sequence alignments
- systems biology
- biomedical literature
- computational approaches
- genome wide
- genomic data
- data mining techniques
- signal transduction
- gene expression
- random walk
- amino acid sequences
- biological networks
- knowledge discovery
- structural properties
- amino acids
- biological systems
- protein structure prediction
- experimental conditions