AAp-MSMD: Amino Acid Preference Mapping on Protein-Protein Interaction Surfaces Using Mixed-Solvent Molecular Dynamics.
Genki KudoKeisuke YanagisawaRyunosuke YoshinoTakatsugu HirokawaPublished in: J. Chem. Inf. Model. (2023)
Keyphrases
- molecular dynamics
- amino acids
- protein folding
- protein function
- protein protein interactions
- predicting protein
- secondary structure
- protein sequences
- protein protein
- computational methods
- amino acid sequences
- experimentally determined
- protein structure
- protein structure prediction
- protein interaction
- high throughput
- gene ontology
- high performance computing
- scientific data
- functional modules
- protein interaction networks
- biomedical literature
- genomic data
- high precision
- structural properties
- network topology
- computational approaches
- protein complexes
- biological processes
- ppi networks
- network analysis
- systems biology
- database systems
- sequence alignment
- interaction networks
- biological data
- biological networks
- data management