FindeR: Accelerating FM-Index-Based Exact Pattern Matching in Genomic Sequences through ReRAM Technology.

Farzaneh Zokaee Mingzhe Zhang Lei Jiang

Published in: PACT (2019)

Keyphrases

pattern matching
genomic sequences
string matching
regular expressions
dna sequences
suffix tree
pattern matching algorithm
bit parallel
matching process
tree matching
database
boyer moore
index structure
b tree
graph matching
approximate pattern matching