Multidimensional Scaling for Gene Sequence Data with Autoencoders.
Pulasthi WickramasingheGeoffrey C. FoxPublished in: CoRR (2021)
Keyphrases
- sequence data
- multidimensional scaling
- nucleotide sequences
- gene clusters
- alternative splicing
- genome sequences
- low dimensional
- euclidean distance
- microarray
- cluster analysis
- latent semantic indexing
- gene expression
- kernel pca
- dimensionality reduction
- vector space
- profile hidden markov models
- genetic variation
- gene expression data
- principal component analysis
- gene ontology
- binding sites
- protein sequences
- data sets
- knowledge discovery
- probabilistic model
- clustering algorithm
- data mining