Deciphering the contribution of 3D interactions between cis-regulatory elements and promoters to regulate gene expression using graph neural networks.
Yang ChenElissa P. LeiPublished in: BCB (2023)
Keyphrases
- gene expression
- regulatory elements
- protein interaction
- binding sites
- microarray
- transcriptional regulation
- gene regulation
- sequence data
- gene expression data
- transcription factors
- dna binding
- transcription factor binding sites
- dna sequences
- microarray data
- biological processes
- gene expression patterns
- regulatory networks
- gene expression profiles
- high throughput
- biological sequences
- motif discovery
- genomic data
- experimental conditions
- biological networks
- graph mining
- data mining