A Combined Expression-Interaction Model for Inferring the Temporal Activity of Transcription Factors.
Yanxin ShiItamar SimonTom M. MitchellZiv Bar-JosephPublished in: RECOMB (2008)
Keyphrases
- interaction model
- transcription factors
- virtual environment
- differential expression
- binding sites
- gene expression
- microarray
- dna binding
- user interface
- cis regulatory
- genome wide
- dna sequences
- transcriptional regulation
- mixed initiative
- component analysis
- regulatory networks
- high throughput
- multi agent systems
- gene regulation
- computational biology
- gene sets
- transcription factor binding sites
- data mining
- social networks
- reinforcement learning
- signaling pathways
- domain knowledge
- web search
- co occurrence
- statistical significance