GateSeeder: Near-memory CPU-FPGA Acceleration of Short and Long Read Mapping.
Julien EudineMohammed AlserGagandeep SinghCan AlkanOnur MutluPublished in: CoRR (2023)
Keyphrases
- high speed
- direct memory access
- parallel hardware
- limited memory
- memory hierarchy
- memory access
- hardware implementation
- memory usage
- field programmable gate array
- level parallelism
- data transfer
- computing power
- signal processing
- memory requirements
- software implementation
- internal memory
- multi threaded
- low cost
- memory management
- multithreading
- real time image processing
- hardware design
- associative memory
- real time
- intel xeon
- fpga implementation
- efficient implementation
- windows xp
- hardware architectures
- reference genome
- verilog hdl