Regular Language Constrained Sequence Alignment Revisited.

Gregory Kucherov Tamar Pinhas Michal Ziv-Ukelson

Published in: IWOCA (2010)

Keyphrases

sequence alignment
pairwise
dynamic programming
programming language
protein sequences
natural language
binding sites
language learning
protein structure
gpu accelerated
multiple alignment
regular languages
context free
amino acids
genetic algorithm
high dimensional
comparative genomics