ASAP: Accelerated Short-Read Alignment on Programmable Hardware.
Subho S. BanerjeeMohamed El-HadedyJong Bin LimZbigniew T. KalbarczykDeming ChenSteven S. LumettaRavishankar K. IyerPublished in: IEEE Trans. Computers (2019)
Keyphrases
- low cost
- single chip
- hardware and software
- real time
- digital signal processors
- signal processor
- general purpose
- general purpose processors
- reference genome
- hardware implementation
- data sets
- computing systems
- computer systems
- image processing
- computing power
- hardware design
- programmable logic
- field programmable gate array
- circuit design
- dynamic time warping
- ontology matching
- hardware architecture
- low power
- embedded systems