Scoring Pairwise Genomic Sequence Alignments.
Francesca ChiaromonteV. B. YapW. MillerPublished in: Pacific Symposium on Biocomputing (2002)
Keyphrases
- pairwise
- genomic sequences
- dna sequences
- multi class
- genomic databases
- sequence alignment
- higher order
- loss function
- previously unknown
- semi supervised
- high order
- global alignment
- markov random field
- similarity measure
- scoring model
- belief propagation
- graph matching
- pairwise interactions
- image segmentation
- pairwise constraints
- statistical significance
- similarity function
- point sets
- multiple sequence alignments
- graphical models
- machine learning